Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs2422777 chr20:2521881 A/C 8.54E-5 167 22.57 18.78 12.57 KM Plot
UCEC rs2463820 chr11:62112290 A/T 1.33E-11 172 4.33 20.72 22.63 KM Plot
UCEC rs2463821 chr11:62111662 T/C 1.49E-11 171 4.33 23.97 22.57 KM Plot
UCEC rs2577573 chr15:72711040 T/G 0.000155 166 6.4 20.62 22.6 KM Plot
UCEC rs259810 chr2:180787821 T/C 2.36E-5 170 16.98 22.8 22.72 KM Plot
UCEC rs259811 chr2:180787801 C/T 0.00014 170 13.63 24.07 22.57 KM Plot
UCEC rs2641563 chr10:88768253 A/G 4.42E-5 169 25.87 23.77 21.83 KM Plot
UCEC rs2659154 chr15:84790476 T/C 3.24E-11 172 22.6 26.8 7.95 KM Plot
UCEC rs28415223 chr5:143583050 G/A 5.68E-9 173 22.57 30.62 2.45 KM Plot
UCEC rs28415985 chr15:84788079 G/A 4.18E-11 174 22.63 27.33 7.95 KM Plot
UCEC rs28474939 chr15:84770946 A/G 5.77E-11 172 22.7 27.33 7.95 KM Plot
UCEC rs28495459 chr14:75392332 G/A 6.68E-5 170 22.7 19.57 1.67 KM Plot
UCEC rs28524677 chr4:186716477 C/T 6.0E-7 172 22.7 23.6 12.57 KM Plot
UCEC rs28535066 chr4:110842418 C/T 1.84E-5 168 21.6 25.47 19.1 KM Plot
UCEC rs28621512 chr14:75398284 G/T 6.95E-5 166 22.67 18.33 1.67 KM Plot